custom, in-house-developed matlab code Search Results


96
MathWorks Inc in house developed matlab toolbox
In House Developed Matlab Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc in house developed matlab software
In House Developed Matlab Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc house developed matlab based toolbox
House Developed Matlab Based Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc in house developed neurophysiological biomarker toolbox nbt
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
In House Developed Neurophysiological Biomarker Toolbox Nbt, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/custom%2C+in-house-developed+matlab+code/bio_rxiv__2025__08__15__670484-178-7-15?v=MathWorks+Inc
Average 96 stars, based on 1 article reviews
in house developed neurophysiological biomarker toolbox nbt - by Bioz Stars, 2026-08
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96
MathWorks Inc matlab 2015b environment
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Matlab 2015b Environment, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Siemens AG twix files
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Twix Files, supplied by Siemens AG, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MathWorks Inc wavelet toolbox
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Wavelet Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
Tektronix inc oscilloscope dpo4043
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Oscilloscope Dpo4043, supplied by Tektronix inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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SourceForge net masson's trichrome stained slides
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Masson's Trichrome Stained Slides, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Canon inc powershot g15 camera
Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. <t>Biomarker</t> values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.
Powershot G15 Camera, supplied by Canon inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. Biomarker values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.

Journal: bioRxiv

Article Title: E/I ratio and net E+I strength are differentially affected across brain disorders

doi: 10.1101/2025.08.15.670484

Figure Lengend Snippet: Both seizure zone ( A , B , E–H ) and non-seizure zone ( C , D , I-L ) electrodes show increases in E/I HLP and E+I HLS during ictal periods. Biomarker values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q =0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate the changes in oscillatory dynamics between the ictal and interictal states.

Article Snippet: EEG analyses were initially pre-processed using the in-house developed Neurophysiological Biomarker Toolbox (NBT) written in MATLAB.

Techniques: Biomarker Discovery

(A) During ictal periods, the seizure zone (SOZ) exhibits significantly higher E/I HLP compared to non-seizure zone (nSOZ). (C) During interictal periods, on the other hand, the seizure zone has lower E/I HLP . (B , D) E+I HLS is significantly higher in the seizure zone regardless of the seizure status. Biomarker values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q = 0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate differences in oscillatory dynamics between SOZ and nSOZ.

Journal: bioRxiv

Article Title: E/I ratio and net E+I strength are differentially affected across brain disorders

doi: 10.1101/2025.08.15.670484

Figure Lengend Snippet: (A) During ictal periods, the seizure zone (SOZ) exhibits significantly higher E/I HLP compared to non-seizure zone (nSOZ). (C) During interictal periods, on the other hand, the seizure zone has lower E/I HLP . (B , D) E+I HLS is significantly higher in the seizure zone regardless of the seizure status. Biomarker values were averaged across seizure (SOZ)/non-seizure zone (nSOZ) electrodes, and a paired t -test was run across subject-level averages. Circles ( A–D ) correspond to frequency bins where comparisons stayed significant after FDR correction ( q = 0.05). ( E–L ) A representative subject was selected, and sample traces of the oscillatory power time series were plotted for a selected frequency band (10.5-13.4 Hz), along with the bimodal power distributions, to illustrate differences in oscillatory dynamics between SOZ and nSOZ.

Article Snippet: EEG analyses were initially pre-processed using the in-house developed Neurophysiological Biomarker Toolbox (NBT) written in MATLAB.

Techniques: Biomarker Discovery

(A) Logistic regression models reveal that patients with Alzheimer’s, ADHD, or ASD can be distinguished from healthy controls by alterations in E/I HLP and E+I HLS . Significance for each disorder was assessed by comparing the average AUC-ROC (black dot) across 50 cross-validation folds against a null distribution generated with 500 random permutations (gray violin plot). Black asterisk reflects significance after FDR ( q = 0.05) correction. (B) When training logistic regression separately for E/I HLP and E+I HLS , we found Alzheimer’s disease showing mostly disruptions in E/I ratio, while ASD and ADHD more prominent changes in E+I density. To illustrate how the relative contribution of E/I HLP and E+I HLS differs across the three disorders, we plotted disorder-specific case-control averages of each biomarker across the frequency spectrum ( C–H ). Asterisks above a trace mark frequency bins in which patient and control means differ significantly (two-sample t -test, FDR-corrected at q = 0.05, performed separately for every disorder-by-biomarker combination).

Journal: bioRxiv

Article Title: E/I ratio and net E+I strength are differentially affected across brain disorders

doi: 10.1101/2025.08.15.670484

Figure Lengend Snippet: (A) Logistic regression models reveal that patients with Alzheimer’s, ADHD, or ASD can be distinguished from healthy controls by alterations in E/I HLP and E+I HLS . Significance for each disorder was assessed by comparing the average AUC-ROC (black dot) across 50 cross-validation folds against a null distribution generated with 500 random permutations (gray violin plot). Black asterisk reflects significance after FDR ( q = 0.05) correction. (B) When training logistic regression separately for E/I HLP and E+I HLS , we found Alzheimer’s disease showing mostly disruptions in E/I ratio, while ASD and ADHD more prominent changes in E+I density. To illustrate how the relative contribution of E/I HLP and E+I HLS differs across the three disorders, we plotted disorder-specific case-control averages of each biomarker across the frequency spectrum ( C–H ). Asterisks above a trace mark frequency bins in which patient and control means differ significantly (two-sample t -test, FDR-corrected at q = 0.05, performed separately for every disorder-by-biomarker combination).

Article Snippet: EEG analyses were initially pre-processed using the in-house developed Neurophysiological Biomarker Toolbox (NBT) written in MATLAB.

Techniques: Biomarker Discovery, Generated, Control